Protein Information

Protein ZmEREB115
ZmEREB115 is a protein in the AP2/ERF-ERF family.
Information
TF Name:	ZmEREB115
Species:	Maize
TF Family:	AP2/ERF-ERF
Gene Name(Synonym):	EREB115
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

ZmEREB115 is a protein in the AP2/ERF-ERF family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
	PF00847
Zm00001eb318910_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Gene ID	Type	Sequence	FIMO	Position
Zm00001d021208	DAPseq	sequence	fimo	position
Zm00001d021208	DAPseq	sequence	fimo	position
Zm00001d021208	ChIPseq	sequence	fimo	position
Zm00001d021208	PChIPseq	sequence	fimo	position

Interactions where ZmEREB115 is the regulator

There are no protein-dna interactions that fit this criteria.

Interactions where ZmEREB115 is the target
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There are 189 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb318910_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MCPTKKGMTGEPSSPCRSASASTLPEHHQTVWTSPPKRPAGRTKFRETRHPVFRGVRRRGSAGRWVCEVRVPGRRGCRLW
LGTFDTAEAAARAHDAAMLALAGAAACCLNFADSAWLLAVPASCASLAEVRHAVADAVEDFLRHQVVPEDDALAATPSSP
SSEDGNTSDGGESSSDSSPPTGASPFEFDVFNDMSWDLHYASLAQGLLVEPPSAVTAFMDEGFADVPLWSY

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00847
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Nucleotide Sequence
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GTATTTTGTCAATCCTCTGTTCCAA...

GRMZM2G069146_T01 from maize genome v3

Related TFome: pUT5644

Amino Acid Sequence
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Nucleotide Sequence
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AAATCGAAAACCACTCGAACACAAA...

Zm00001d021208_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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AAGATGTGCCCAACCAAGAAGGGGA...

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Protein ZmEREB115

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmEREB115 is the regulator

Interactions where ZmEREB115 is the target
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Zm00001eb318910_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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Expand

GRMZM2G069146_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Expand

Zm00001d021208_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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